| 
 | ||||||||||
| PREV CLASS NEXT CLASS | FRAMES NO FRAMES | |||||||||
| SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD | |||||||||
java.lang.Object | +--org.emboss.jemboss.gui.BuildProgramMenu
BuildProgramMenu class construct the program menus.
| Field Summary | |
| private  java.util.Hashtable | acdStoreacd files cache | 
| private static java.util.Vector | codonscodons usage tables | 
| private static java.lang.String[] | dbdatabase names | 
| private static java.util.Vector | matricesmatrices | 
| private  AuthPopup | splashing | 
| private  SplashThread | splashThread | 
| Constructor Summary | |
| BuildProgramMenu(javax.swing.JPanel p1,
                 ScrollPanel p2,
                 javax.swing.JPanel pform,
                 javax.swing.JScrollPane scrollProgForm,
                 java.lang.String embossBin,
                 java.lang.String[] envp,
                 JembossParams mysettings,
                 boolean withSoap,
                 java.lang.String cwd,
                 java.lang.String acdDirToParse,
                 SetUpMenuBar mainMenu,
                 javax.swing.JFrame f,
                 java.awt.Dimension jform) | |
| Method Summary | |
| private  java.lang.String | getAcdText(java.lang.String applName,
           java.lang.String acdDirToParse,
           JembossParams mysettings,
           boolean withSoap)Get the contents of an ACD file in the form of a String. | 
| static java.util.Vector | getCodonUsage() | 
| protected static java.lang.String[] | getDatabaseList()List of available EMBOSS databases. | 
| static java.util.Vector | getMatrices() | 
| Methods inherited from class java.lang.Object | 
| clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait | 
| Field Detail | 
private static java.lang.String[] db
private static java.util.Vector matrices
private static java.util.Vector codons
private java.util.Hashtable acdStore
private AuthPopup splashing
private SplashThread splashThread
| Constructor Detail | 
public BuildProgramMenu(javax.swing.JPanel p1,
                        ScrollPanel p2,
                        javax.swing.JPanel pform,
                        javax.swing.JScrollPane scrollProgForm,
                        java.lang.String embossBin,
                        java.lang.String[] envp,
                        JembossParams mysettings,
                        boolean withSoap,
                        java.lang.String cwd,
                        java.lang.String acdDirToParse,
                        SetUpMenuBar mainMenu,
                        javax.swing.JFrame f,
                        java.awt.Dimension jform)
| Method Detail | 
protected static java.lang.String[] getDatabaseList()
public static java.util.Vector getMatrices()
public static java.util.Vector getCodonUsage()
private java.lang.String getAcdText(java.lang.String applName,
                                    java.lang.String acdDirToParse,
                                    JembossParams mysettings,
                                    boolean withSoap)
| 
 | ||||||||||
| PREV CLASS NEXT CLASS | FRAMES NO FRAMES | |||||||||
| SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD | |||||||||